RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g51280.1 View Network Show in Genome Browser |
| Other Names | Os04g0601800 |
| Description | DAG protein, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30377262-30379530 Nucleotide Length: 672 |
| Protein-coding | LOC_Os04g51280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g55310 LOC_Os03g40550 LOC_Os03g63910 LOC_Os02g54360 LOC_Os01g63220 LOC_Os03g43420 LOC_Os03g01910 LOC_Os01g71190 LOC_Os03g25960 |
| Downstream Genes | LOC_Os06g02380 LOC_Os08g09270 LOC_Os12g17910 LOC_Os04g52100 LOC_Os12g37610 LOC_Os05g49220 LOC_Os11g23790 LOC_Os07g06450 LOC_Os08g02340 LOC_Os08g29110 LOC_Os11g05552 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g51280.1 |
| Rice Genome Annotation | LOC_Os04g51280.1 |
| Ricechip | LOC_Os04g51280.1 |
| KEGG | osa:4336884 dosa:Os04t0601800-01 |
| Entrez-Gene | 4336884 |