RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g51370.1 View Network Show in Genome Browser |
| Other Names | Os04g0602800 |
| Description | protein kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30416446-30424148 Nucleotide Length: 2775 |
| Protein-coding | LOC_Os04g51370 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49000 LOC_Os03g51020 LOC_Os02g05630 LOC_Os02g32430 LOC_Os03g21620 LOC_Os01g62080 LOC_Os04g37904 LOC_Os02g47220 LOC_Os02g04240 LOC_Os03g43590 LOC_Os02g55300 More.. |
| Downstream Genes | LOC_Os06g02550 LOC_Os07g48290 LOC_Os06g48300 LOC_Os04g56450 LOC_Os06g33549 LOC_Os12g41180 LOC_Os07g08000 LOC_Os05g39080 LOC_Os07g32380 LOC_Os06g46000 LOC_Os05g34170 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR169e osa-miR169b osa-miR169c |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g51370.1 |
| Rice Genome Annotation | LOC_Os04g51370.1 |
| Ricechip | LOC_Os04g51370.1 |
| KEGG | osa:4336893 dosa:Os04t0602800-01 |
| Entrez-Gene | 4336893 |