RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g51380.2 View Network Show in Genome Browser |
| Other Names | Os04g0602900 |
| Description | protein-S-isoprenylcysteine O-methyltransferase. tax, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30428216-30431745 Nucleotide Length: 432 |
| Protein-coding | LOC_Os04g51380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g18670 LOC_Os01g53600 LOC_Os02g20850 LOC_Os02g58730 LOC_Os02g02840 LOC_Os01g50160 LOC_Os03g60260 LOC_Os02g45650 LOC_Os01g50100 LOC_Os02g50860 LOC_Os01g50080 More.. |
| Downstream Genes | LOC_Os07g12770 LOC_Os05g47490 LOC_Os09g33930 LOC_Os05g47500 LOC_Os06g12790 LOC_Os09g17840 LOC_Os09g17830 LOC_Os05g43820 LOC_Os09g33450 LOC_Os08g42620 LOC_Os04g55210 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g51380.2 |
| Rice Genome Annotation | LOC_Os04g51380.2 |
| Ricechip | LOC_Os04g51380.2 |
| KEGG | osa:4336894 dosa:Os04t0602900-02 |
| Entrez-Gene | 4336894 |