RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g51390.1 View Network Show in Genome Browser |
| Other Names | Os04g0603000 |
| Description | aldose 1-epimerase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30433199-30438328 Nucleotide Length: 978 |
| Protein-coding | LOC_Os04g51390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0030246 | carbohydrate binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g13150 LOC_Os02g07490 LOC_Os04g40950 LOC_Os02g38920 LOC_Os02g47850 LOC_Os03g55640 LOC_Os03g03720 |
| Downstream Genes | LOC_Os05g51670 LOC_Os08g28730 LOC_Os09g15420 LOC_Os06g07960 LOC_Os06g07860 LOC_Os09g35800 LOC_Os08g03290 LOC_Os06g45590 LOC_Os06g27760 LOC_Os08g19850 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g51390.1 |
| Rice Genome Annotation | LOC_Os04g51390.1 |
| Ricechip | LOC_Os04g51390.1 |
| KEGG | osa:9268618 dosa:Os04t0603000-00 |
| Entrez-Gene | 9268618 |