RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os04g51440.1 View Network Show in Genome Browser
Other Names	Os04g0604000
Description	villin protein, putative, expressed
Gene Attributes	Chromosome: Chr4 CDS Coordinates (5'-3'): 30463864-30473000 Nucleotide Length: 2841
Protein-coding	LOC_Os04g51440

Gene Ontology Classification
GO	Name	Type	Code
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0016049	cell growth	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005856	cytoskeleton	Cellular Component	IEA
GO:0005829	cytosol	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g73310 LOC_Os03g10790 LOC_Os03g06070 LOC_Os01g66690 LOC_Os02g42740 LOC_Os01g16110 LOC_Os03g61970 LOC_Os01g73990 LOC_Os02g43360 LOC_Os03g20470 LOC_Os01g40570 More..
Downstream Genes	LOC_Os11g24560 LOC_Os11g29200 LOC_Os12g24250 LOC_Os05g01600 LOC_Os10g37420 LOC_Os10g35870 LOC_Os08g36994 LOC_Os09g28610 LOC_Os09g16920 LOC_Os11g06390 LOC_Os05g01820 More..

miRNA Regulations
miRNAs	osa-miR2919

Database Links
Gramene	LOC_Os04g51440.1
Rice Genome Annotation	LOC_Os04g51440.1
Ricechip	LOC_Os04g51440.1
KEGG	osa:4336902 dosa:Os04t0604000-01
Entrez-Gene	4336902