RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g51520.1 View Network Show in Genome Browser |
| Other Names | Os04g0604900 |
| Description | glycosyl hydrolases family 16, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30520356-30523556 Nucleotide Length: 966 |
| Protein-coding | LOC_Os04g51520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g37500 LOC_Os03g51980 LOC_Os02g17900 LOC_Os02g17880 LOC_Os02g44730 LOC_Os04g35060 LOC_Os02g09240 |
| Downstream Genes | LOC_Os10g02630 LOC_Os06g22919 LOC_Os08g44270 LOC_Os08g24750 LOC_Os07g48060 LOC_Os10g40700 LOC_Os04g53950 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g51520.1 |
| Rice Genome Annotation | LOC_Os04g51520.1 |
| Ricechip | LOC_Os04g51520.1 |
| KEGG | osa:4336908 dosa:Os04t0604900-01 |
| Entrez-Gene | 4336908 |