RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g51570.1 View Network Show in Genome Browser |
| Other Names | Os04g0605200 |
| Description | tyrosine phosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30550961-30552136 Nucleotide Length: 558 |
| Protein-coding | LOC_Os04g51570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g08450 LOC_Os01g22490 LOC_Os04g30780 LOC_Os03g41438 LOC_Os04g36890 LOC_Os03g18580 LOC_Os03g18570 LOC_Os03g38980 LOC_Os03g02960 LOC_Os01g59990 LOC_Os04g39700 More.. |
| Downstream Genes | LOC_Os08g44320 LOC_Os08g02410 LOC_Os08g02400 LOC_Os07g40460 LOC_Os11g03400 LOC_Os12g03090 LOC_Os07g33997 LOC_Os07g33921 LOC_Os07g33898 LOC_Os07g26740 LOC_Os07g33860 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g51570.1 |
| Rice Genome Annotation | LOC_Os04g51570.1 |
| Ricechip | LOC_Os04g51570.1 |
| KEGG | osa:4336910 dosa:Os04t0605200-01 |
| Entrez-Gene | 4336910 |