RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g51690.1 View Network Show in Genome Browser |
| Other Names | Os04g0606400 |
| Description | glycosyl hydrolase family 47 domain contain protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30621160-30628372 Nucleotide Length: 1719 |
| Protein-coding | LOC_Os04g51690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g11670 LOC_Os01g53420 LOC_Os01g53380 LOC_Os01g53370 LOC_Os01g53390 LOC_Os01g68010 LOC_Os03g56310 LOC_Os03g60870 LOC_Os01g50200 LOC_Os02g11640 LOC_Os02g11700 More.. |
| Downstream Genes | LOC_Os09g16090 LOC_Os07g30610 LOC_Os06g18790 LOC_Os05g45180 LOC_Os05g08510 LOC_Os06g18670 LOC_Os07g30330 LOC_Os07g30760 LOC_Os07g30620 LOC_Os07g30469 LOC_Os07g30369 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00513 rn01100 rn00510 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g51690.1 |
| Rice Genome Annotation | LOC_Os04g51690.1 |
| Ricechip | LOC_Os04g51690.1 |
| KEGG | osa:4336917 dosa:Os04t0606400-01 |
| Entrez-Gene | 4336917 |