RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g51786.1 View Network Show in Genome Browser |
| Other Names | Os04g0606900 |
| Description | containing DUF163, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30685422-30687861 Nucleotide Length: 591 |
| Protein-coding | LOC_Os04g51786 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62900 LOC_Os02g57060 LOC_Os03g21260 LOC_Os01g60190 LOC_Os03g41229 |
| Downstream Genes | LOC_Os12g13824 LOC_Os09g32030 LOC_Os05g38150 LOC_Os06g21380 LOC_Os04g58900 LOC_Os09g32650 LOC_Os05g40420 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g51786.1 |
| Rice Genome Annotation | LOC_Os04g51786.1 |
| Ricechip | LOC_Os04g51786.1 |
| KEGG | osa:4336921 dosa:Os04t0606900-01 |
| Entrez-Gene | 4336921 |