RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g51792.1 View Network Show in Genome Browser |
| Other Names | Os04g0607000 |
| Description | PAP fibrillin family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30688097-30689790 Nucleotide Length: 660 |
| Protein-coding | LOC_Os04g51792 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g46610 LOC_Os02g06300 LOC_Os02g02520 LOC_Os04g33830 LOC_Os03g50270 LOC_Os01g68480 LOC_Os04g28180 LOC_Os02g51470 LOC_Os03g27310 LOC_Os02g39160 LOC_Os02g37060 More.. |
| Downstream Genes | LOC_Os07g28790 LOC_Os11g38260 LOC_Os10g42500 LOC_Os09g04790 LOC_Os10g10170 LOC_Os07g47640 LOC_Os06g13660 LOC_Os08g44680 LOC_Os11g13890 LOC_Os07g18720 LOC_Os09g10750 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g51792.1 |
| Rice Genome Annotation | LOC_Os04g51792.1 |
| Ricechip | LOC_Os04g51792.1 |
| KEGG | osa:4336922 dosa:Os04t0607000-02 |
| Entrez-Gene | 4336922 |