RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g51900.1 View Network Show in Genome Browser |
| Other Names | Os04g0608400 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30791816-30797525 Nucleotide Length: 2319 |
| Protein-coding | LOC_Os04g51900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005635 | nuclear envelope | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g13990 LOC_Os01g51300 LOC_Os02g34570 LOC_Os03g51900 LOC_Os04g02870 LOC_Os03g22690 LOC_Os02g44810 LOC_Os03g22740 LOC_Os03g22730 LOC_Os02g46450 LOC_Os03g61790 More.. |
| Downstream Genes | LOC_Os07g12320 LOC_Os07g08170 LOC_Os08g02130 LOC_Os05g40820 LOC_Os05g44320 LOC_Os10g34040 LOC_Os09g29630 LOC_Os06g37570 LOC_Os05g51790 LOC_Os07g37640 LOC_Os08g03682 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g51900.1 |
| Rice Genome Annotation | LOC_Os04g51900.1 |
| Ricechip | LOC_Os04g51900.1 |
| KEGG | osa:4336930 dosa:Os04t0608400-01 |
| Entrez-Gene | 4336930 |