RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g51940.1 View Network Show in Genome Browser |
| Other Names | Os04g0608800 |
| Description | YT521-B, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30821130-30825520 Nucleotide Length: 1725 |
| Protein-coding | LOC_Os04g51940 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g52790 LOC_Os01g43710 LOC_Os03g54091 LOC_Os01g43750 LOC_Os01g43700 LOC_Os01g43774 LOC_Os01g41820 LOC_Os01g43740 LOC_Os01g43844 LOC_Os01g41810 LOC_Os01g43851 More.. |
| Downstream Genes | LOC_Os09g10850 LOC_Os05g30890 LOC_Os09g33970 LOC_Os09g07500 LOC_Os07g44140 LOC_Os07g23570 LOC_Os07g44110 LOC_Os05g33600 LOC_Os06g09210 LOC_Os07g45290 LOC_Os08g39300 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g51940.1 |
| Rice Genome Annotation | LOC_Os04g51940.1 |
| Ricechip | LOC_Os04g51940.1 |
| KEGG | osa:4336934 dosa:Os04t0608800-01 |
| Entrez-Gene | 4336934 |