RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g52100.1 View Network Show in Genome Browser |
| Other Names | Os04g0610500 |
| Description | peptidase, M24 family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 30945118-30948691 Nucleotide Length: 1023 |
| Protein-coding | LOC_Os04g52100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g24612 LOC_Os02g13140 LOC_Os01g63830 LOC_Os04g41300 LOC_Os03g29980 LOC_Os03g38230 LOC_Os02g34990 LOC_Os04g32110 LOC_Os03g14370 LOC_Os02g03460 LOC_Os04g25550 More.. |
| Downstream Genes | LOC_Os12g43370 LOC_Os05g28280 LOC_Os07g10540 LOC_Os07g38300 LOC_Os11g33330 LOC_Os06g39906 LOC_Os08g42100 LOC_Os08g42910 LOC_Os12g35630 LOC_Os08g42080 LOC_Os05g02220 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g52100.1 |
| Rice Genome Annotation | LOC_Os04g52100.1 |
| Ricechip | LOC_Os04g52100.1 |
| KEGG | osa:4336948 dosa:Os04t0610500-01 |
| Entrez-Gene | 4336948 |