RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g52200.1 View Network Show in Genome Browser |
| Other Names | Os04g0611500 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31007297-31013915 Nucleotide Length: 2715 |
| Protein-coding | LOC_Os04g52200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g46310 LOC_Os03g52470 LOC_Os02g50370 LOC_Os03g05720 LOC_Os01g40340 LOC_Os03g61200 LOC_Os01g65220 LOC_Os03g22890 LOC_Os01g13730 LOC_Os01g34200 LOC_Os01g66520 More.. |
| Downstream Genes | LOC_Os07g10350 LOC_Os10g25110 LOC_Os05g51490 LOC_Os11g01420 LOC_Os07g33340 LOC_Os11g19250 LOC_Os07g47420 LOC_Os12g01430 LOC_Os06g40120 LOC_Os07g16950 LOC_Os04g58830 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g52200.1 |
| Rice Genome Annotation | LOC_Os04g52200.1 |
| Ricechip | LOC_Os04g52200.1 |
| KEGG | osa:4336958 dosa:Os04t0611500-01 |
| Entrez-Gene | 4336958 |