RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g52270.1 View Network Show in Genome Browser |
| Other Names | Os04g0612600 |
| Description | coatomer subunit epsilon, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31063845-31068874 Nucleotide Length: 864 |
| Protein-coding | LOC_Os04g52270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59790 LOC_Os03g59740 LOC_Os01g16030 LOC_Os03g50340 LOC_Os03g50350 LOC_Os03g11440 LOC_Os01g17430 LOC_Os01g43220 LOC_Os03g12590 LOC_Os03g63920 LOC_Os02g11830 More.. |
| Downstream Genes | LOC_Os05g41060 LOC_Os07g12200 LOC_Os07g12170 LOC_Os09g04110 LOC_Os07g10150 LOC_Os09g17840 LOC_Os09g17830 LOC_Os11g07280 LOC_Os09g13680 LOC_Os06g40960 LOC_Os12g10560 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g52270.1 |
| Rice Genome Annotation | LOC_Os04g52270.1 |
| Ricechip | LOC_Os04g52270.1 |
| KEGG | osa:4336967 dosa:Os04t0612600-01 |
| Entrez-Gene | 4336967 |