RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g52280.1 View Network Show in Genome Browser |
| Other Names | Os04g0612700 |
| Description | dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31069545-31075601 Nucleotide Length: 1140 |
| Protein-coding | LOC_Os04g52280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g27300 LOC_Os01g28450 LOC_Os02g32490 LOC_Os02g02700 LOC_Os04g33190 LOC_Os02g35630 LOC_Os04g41960 LOC_Os01g24030 LOC_Os01g28500 LOC_Os03g49770 LOC_Os02g12794 More.. |
| Downstream Genes | LOC_Os07g14070 LOC_Os07g14030 LOC_Os07g03730 LOC_Os07g03710 LOC_Os10g05660 LOC_Os09g36560 LOC_Os08g43510 LOC_Os07g03690 LOC_Os09g16920 LOC_Os05g02510 LOC_Os07g03740 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g52280.1 |
| Rice Genome Annotation | LOC_Os04g52280.1 |
| Ricechip | LOC_Os04g52280.1 |
| KEGG | osa:4336968 dosa:Os04t0612700-01 |
| Entrez-Gene | 4336968 |