RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g52290.1 View Network Show in Genome Browser |
| Other Names | Os04g0612800 |
| Description | PPR repeat domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31073380-31076344 Nucleotide Length: 2352 |
| Protein-coding | LOC_Os04g52290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g36058 LOC_Os02g02770 LOC_Os01g12530 |
| Downstream Genes | LOC_Os06g09890 LOC_Os07g40310 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g52290.1 |
| Rice Genome Annotation | LOC_Os04g52290.1 |
| Ricechip | LOC_Os04g52290.1 |
| KEGG | osa:4336969 dosa:Os04t0612800-01 |
| Entrez-Gene | 4336969 |