RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g52380.1 View Network Show in Genome Browser |
| Other Names | Os04g0613800 |
| Description | methyl-CpG binding domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31119404-31124152 Nucleotide Length: 1185 |
| Protein-coding | LOC_Os04g52380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g64560 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1862f osa-miR1862g |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g52380.1 |
| Rice Genome Annotation | LOC_Os04g52380.1 |
| Ricechip | LOC_Os04g52380.1 |
| KEGG | osa:4336978 dosa:Os04t0613800-01 |
| Entrez-Gene | 4336978 |