RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g52460.1 View Network Show in Genome Browser |
| Other Names | Os04g0614700,Os04g0614650 |
| Description | retrotransposon protein, putative, unclassified, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31187349-31195906 Nucleotide Length: 4533 |
| Protein-coding | LOC_Os04g52460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g42320 LOC_Os01g64650 LOC_Os03g57760 LOC_Os01g73300 LOC_Os02g04240 LOC_Os02g53140 LOC_Os01g13350 LOC_Os03g43020 LOC_Os02g26440 LOC_Os02g14860 LOC_Os03g37970 More.. |
| Downstream Genes | LOC_Os06g09850 LOC_Os08g15040 LOC_Os07g26974 LOC_Os12g37590 LOC_Os12g30060 LOC_Os11g36050 LOC_Os06g02510 LOC_Os05g43610 LOC_Os05g50300 LOC_Os08g05890 LOC_Os09g27420 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR395x |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g52460.1 |
| Rice Genome Annotation | LOC_Os04g52460.1 |
| Ricechip | LOC_Os04g52460.1 |
| KEGG | osa:4336984 dosa:Os04t0614700-01dosa:Os04t0614650-00 |
| Entrez-Gene | 4336984 |