RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g52710.3 View Network Show in Genome Browser |
| Other Names | Os04g0617800 |
| Description | imidazoleglycerol-phosphate dehydratase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31389665-31393995 Nucleotide Length: 639 |
| Protein-coding | LOC_Os04g52710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g54230 LOC_Os03g15120 LOC_Os01g13190 LOC_Os03g04169 LOC_Os01g16940 LOC_Os02g47940 LOC_Os03g20630 LOC_Os01g59750 LOC_Os04g45280 LOC_Os01g54030 LOC_Os01g07500 More.. |
| Downstream Genes | LOC_Os05g33260 LOC_Os06g45660 LOC_Os08g14580 LOC_Os07g45300 LOC_Os05g07720 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g52710.3 |
| Rice Genome Annotation | LOC_Os04g52710.3 |
| Ricechip | LOC_Os04g52710.3 |
| KEGG | osa:4337007 dosa:Os04t0617800-01 |
| Entrez-Gene | 4337007 |