RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g52720.1 View Network Show in Genome Browser |
| Other Names | Os04g0617900 |
| Description | Cupin domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31392876-31395185 Nucleotide Length: 765 |
| Protein-coding | LOC_Os04g52720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g21790 LOC_Os02g15150 LOC_Os01g55690 LOC_Os02g15178 LOC_Os02g15169 LOC_Os03g10110 LOC_Os02g16830 LOC_Os02g16820 LOC_Os02g15070 LOC_Os01g22352 |
| Downstream Genes | LOC_Os08g03410 LOC_Os10g26060 LOC_Os12g36880 LOC_Os06g38660 LOC_Os08g02094 LOC_Os06g39110 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g52720.1 |
| Rice Genome Annotation | LOC_Os04g52720.1 |
| Ricechip | LOC_Os04g52720.1 |
| KEGG | osa:4337008 dosa:Os04t0617900-01 |
| Entrez-Gene | 4337008 |