RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g52760.1 View Network Show in Genome Browser |
| Other Names | Os04g0618500 |
| Description | gamma-soluble NSF attachment protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31412135-31416160 Nucleotide Length: 669 |
| Protein-coding | LOC_Os04g52760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g02720 |
| Downstream Genes | LOC_Os05g44310 LOC_Os08g17600 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g52760.1 |
| Rice Genome Annotation | LOC_Os04g52760.1 |
| Ricechip | LOC_Os04g52760.1 |
| KEGG | osa:4337014 dosa:Os04t0618500-01 |
| Entrez-Gene | 4337014 |