RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g53130.1 View Network Show in Genome Browser |
| Other Names | Os04g0622800 |
| Description | bromodomain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31645664-31649090 Nucleotide Length: 1068 |
| Protein-coding | LOC_Os04g53130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g53070 LOC_Os03g19340 LOC_Os02g39970 LOC_Os01g13370 LOC_Os02g19140 LOC_Os03g06720 LOC_Os03g62850 |
| Downstream Genes | LOC_Os04g53170 LOC_Os06g19680 LOC_Os05g14860 LOC_Os08g26870 LOC_Os10g33700 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g53130.1 |
| Rice Genome Annotation | LOC_Os04g53130.1 |
| Ricechip | LOC_Os04g53130.1 |
| KEGG | dosa:Os04t0622800-00 |