RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g53370.1 View Network Show in Genome Browser |
| Other Names | Os04g0625200 |
| Description | acyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31786589-31788246 Nucleotide Length: 879 |
| Protein-coding | LOC_Os04g53370 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g57360 LOC_Os01g70570 LOC_Os03g19870 LOC_Os02g45344 LOC_Os03g49770 LOC_Os03g26450 LOC_Os02g56300 LOC_Os03g14800 LOC_Os04g42010 LOC_Os02g48740 LOC_Os01g33080 More.. |
| Downstream Genes | LOC_Os05g42270 LOC_Os11g41900 LOC_Os06g49790 LOC_Os07g34730 LOC_Os04g55040 LOC_Os12g31380 LOC_Os08g17680 LOC_Os10g40590 LOC_Os10g11200 LOC_Os08g34190 LOC_Os12g18770 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g53370.1 |
| Rice Genome Annotation | LOC_Os04g53370.1 |
| Ricechip | LOC_Os04g53370.1 |
| KEGG | osa:4337061 dosa:Os04t0625200-00 |
| Entrez-Gene | 4337061 |