RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g53440.2 View Network Show in Genome Browser |
| Other Names | Os04g0625800 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31819460-31823481 Nucleotide Length: 1278 |
| Protein-coding | LOC_Os04g53440 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g39300 LOC_Os03g22570 LOC_Os03g11200 LOC_Os02g37430 LOC_Os04g39444 LOC_Os03g13760 LOC_Os02g01250 LOC_Os02g39890 LOC_Os03g62640 LOC_Os03g03140 LOC_Os02g11750 More.. |
| Downstream Genes | LOC_Os10g34380 LOC_Os10g02630 LOC_Os05g24970 LOC_Os11g43620 LOC_Os09g02700 LOC_Os07g46820 LOC_Os05g13620 LOC_Os09g37720 LOC_Os11g07490 LOC_Os05g07050 LOC_Os08g22354 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g53440.2 |
| Rice Genome Annotation | LOC_Os04g53440.2 |
| Ricechip | LOC_Os04g53440.2 |
| KEGG | osa:4337064 dosa:Os04t0625800-01 |
| Entrez-Gene | 4337064 |