RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g53450.1 View Network Show in Genome Browser |
| Other Names | Os04g0625900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31824087-31828926 Nucleotide Length: 1359 |
| Protein-coding | LOC_Os04g53450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g39444 LOC_Os04g36810 LOC_Os03g29740 LOC_Os02g30624 LOC_Os02g08090 LOC_Os02g03440 LOC_Os02g01250 LOC_Os01g64690 LOC_Os01g15310 LOC_Os03g13760 |
| Downstream Genes | LOC_Os08g08040 LOC_Os07g07220 LOC_Os06g46390 LOC_Os05g32310 LOC_Os06g10410 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g53450.1 |
| Rice Genome Annotation | LOC_Os04g53450.1 |
| Ricechip | LOC_Os04g53450.1 |
| KEGG | osa:4337065 dosa:Os04t0625900-01 |
| Entrez-Gene | 4337065 |