RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g53680.1 View Network Show in Genome Browser |
| Other Names | Os04g0628900 |
| Description | cyclin, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31995412-31998446 Nucleotide Length: 795 |
| Protein-coding | LOC_Os04g53680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g41100 LOC_Os03g12414 LOC_Os03g52750 LOC_Os01g27940 LOC_Os03g13480 LOC_Os04g47580 LOC_Os02g24190 LOC_Os02g04010 |
| Downstream Genes | LOC_Os12g30020 LOC_Os12g31810 LOC_Os06g51110 LOC_Os05g41390 LOC_Os12g39830 LOC_Os09g29100 LOC_Os08g37390 LOC_Os08g32540 LOC_Os08g42020 LOC_Os09g32680 LOC_Os12g39210 More.. |
| Reference | |
|---|---|
| PubMed | 16435118 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g53680.1 |
| Rice Genome Annotation | LOC_Os04g53680.1 |
| Ricechip | LOC_Os04g53680.1 |
| KEGG | dosa:Os04t0628900-00 |