RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g53690.2 View Network Show in Genome Browser |
| Other Names | Os04g0629000 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 31999366-32002755 Nucleotide Length: 312 |
| Protein-coding | LOC_Os04g53690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g42314 LOC_Os03g25070 LOC_Os03g09280 LOC_Os02g44330 |
| Downstream Genes | LOC_Os09g34040 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g53690.2 |
| Rice Genome Annotation | LOC_Os04g53690.2 |
| Ricechip | LOC_Os04g53690.2 |
| KEGG | osa:4337087 dosa:Os04t0629000-02 |
| Entrez-Gene | 4337087 |