RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g53720.1 View Network Show in Genome Browser |
| Other Names | Os04g0629300 |
| Description | SNF2 family N-terminal domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 32009476-32016407 Nucleotide Length: 3156 |
| Protein-coding | LOC_Os04g53720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g63710 LOC_Os01g54240 LOC_Os03g50850 LOC_Os02g57290 LOC_Os01g57110 LOC_Os03g60110 LOC_Os04g52370 LOC_Os02g31150 LOC_Os03g43570 LOC_Os01g42850 LOC_Os03g19059 More.. |
| Downstream Genes | LOC_Os06g08790 LOC_Os11g04954 LOC_Os12g04980 LOC_Os08g41500 LOC_Os06g19680 LOC_Os07g22840 LOC_Os12g03720 LOC_Os07g34520 LOC_Os12g01190 LOC_Os11g03900 LOC_Os08g10600 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2055 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g53720.1 |
| Rice Genome Annotation | LOC_Os04g53720.1 |
| Ricechip | LOC_Os04g53720.1 |
| KEGG | osa:4337089 dosa:Os04t0629300-02 |
| Entrez-Gene | 4337089 |