RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g53800.1 View Network Show in Genome Browser |
| Other Names | Os04g0630300 |
| Description | leucoanthocyanidin reductase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 32059521-32062391 Nucleotide Length: 1041 |
| Protein-coding | LOC_Os04g53800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04710 LOC_Os03g61360 LOC_Os01g15120 LOC_Os03g61340 LOC_Os01g69970 |
| Downstream Genes | LOC_Os09g09480 LOC_Os06g40620 LOC_Os12g02830 LOC_Os11g03060 LOC_Os11g18366 LOC_Os10g35540 LOC_Os07g38830 LOC_Os10g35520 LOC_Os10g35530 LOC_Os10g35490 LOC_Os11g35710 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-2582 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g53800.1 |
| Rice Genome Annotation | LOC_Os04g53800.1 |
| Ricechip | LOC_Os04g53800.1 |
| KEGG | osa:4337096 dosa:Os04t0630300-01 |
| Entrez-Gene | 4337096 |