RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g53830.1 View Network Show in Genome Browser |
| Other Names | Os04g0630600 |
| Description | 3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 32078551-32081906 Nucleotide Length: 1074 |
| Protein-coding | LOC_Os04g53830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04710 |
| Downstream Genes | LOC_Os11g18366 LOC_Os11g35710 LOC_Os11g18194 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5788 osa-miR816 osa-miR2863b |
| Pathways | |
|---|---|
| KEGG Pathways | rn00941 rn01100 rn01110 |
| Metacyc Pathways | PWY1F-823 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g53830.1 |
| Rice Genome Annotation | LOC_Os04g53830.1 |
| Ricechip | LOC_Os04g53830.1 |
| KEGG | osa:4337098 dosa:Os04t0630600-00 |
| Entrez-Gene | 4337098 |