RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g53950.1 View Network Show in Genome Browser |
| Other Names | Os04g0631200 |
| Description | glycosyl hydrolases family 16 protein, protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 32145679-32147540 Nucleotide Length: 987 |
| Protein-coding | LOC_Os04g53950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g69290 LOC_Os04g51520 |
| Downstream Genes | LOC_Os08g37390 LOC_Os08g13920 LOC_Os09g34970 LOC_Os10g26660 LOC_Os05g43560 LOC_Os09g07820 LOC_Os07g44660 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g53950.1 |
| Rice Genome Annotation | LOC_Os04g53950.1 |
| Ricechip | LOC_Os04g53950.1 |
| KEGG | osa:4337104 dosa:Os04t0631200-01 |
| Entrez-Gene | 4337104 |