RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g54330.3 View Network Show in Genome Browser |
| Other Names | Os04g0635800 |
| Description | acetyltransferase, GNAT family, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 32340668-32342426 Nucleotide Length: 597 |
| Protein-coding | LOC_Os04g54330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g43030 LOC_Os01g42470 LOC_Os03g49230 LOC_Os03g05710 LOC_Os02g46700 LOC_Os03g09860 LOC_Os02g48650 LOC_Os03g58010 LOC_Os03g55530 LOC_Os03g46200 LOC_Os02g56219 More.. |
| Downstream Genes | LOC_Os09g31310 LOC_Os10g28040 LOC_Os05g32180 LOC_Os09g17850 LOC_Os08g01170 LOC_Os05g40260 LOC_Os08g05840 LOC_Os07g13280 LOC_Os12g07300 LOC_Os12g36170 LOC_Os06g13000 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2055 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g54330.3 |
| Rice Genome Annotation | LOC_Os04g54330.3 |
| Ricechip | LOC_Os04g54330.3 |
| KEGG | osa:4337136 dosa:Os04t0635800-01 |
| Entrez-Gene | 4337136 |