RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g54410.1 View Network Show in Genome Browser |
| Other Names | Os04g0636600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 32370810-32378071 Nucleotide Length: 1917 |
| Protein-coding | LOC_Os04g54410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02150 LOC_Os03g21950 LOC_Os03g04410 LOC_Os02g58490 LOC_Os04g32330 LOC_Os01g49190 LOC_Os01g58680 LOC_Os02g40830 LOC_Os01g19470 LOC_Os03g57100 LOC_Os01g08450 More.. |
| Downstream Genes | LOC_Os12g07740 LOC_Os08g12840 LOC_Os11g43860 LOC_Os12g07820 LOC_Os09g08910 LOC_Os12g18880 LOC_Os05g47980 LOC_Os09g25620 LOC_Os05g44922 LOC_Os06g37180 LOC_Os08g09200 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g54410.1 |
| Rice Genome Annotation | LOC_Os04g54410.1 |
| Ricechip | LOC_Os04g54410.1 |
| KEGG | osa:4337144 dosa:Os04t0636600-02 |
| Entrez-Gene | 4337144 |