RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g54430.1 View Network Show in Genome Browser |
| Other Names | Os04g0636800 |
| Description | immediate-early protein RSP40, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 32383898-32387161 Nucleotide Length: 537 |
| Protein-coding | LOC_Os04g54430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g51300 LOC_Os04g40420 LOC_Os02g43560 LOC_Os02g36710 LOC_Os03g10990 LOC_Os02g18830 LOC_Os02g05310 LOC_Os02g57380 |
| Downstream Genes | LOC_Os04g54440 LOC_Os05g24970 LOC_Os11g40090 LOC_Os07g22950 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g54430.1 |
| Rice Genome Annotation | LOC_Os04g54430.1 |
| Ricechip | LOC_Os04g54430.1 |
| KEGG | osa:4337146 dosa:Os04t0636800-01 |
| Entrez-Gene | 4337146 |