RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g54640.1 View Network Show in Genome Browser |
| Other Names | Os04g0639300 |
| Description | peptidase, cysteine peptidase active site, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 32483013-32485554 Nucleotide Length: 978 |
| Protein-coding | LOC_Os04g54640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02670 LOC_Os01g03020 |
| Downstream Genes | LOC_Os04g56320 LOC_Os05g50330 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5489 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g54640.1 |
| Rice Genome Annotation | LOC_Os04g54640.1 |
| Ricechip | LOC_Os04g54640.1 |
| KEGG | osa:4337160 dosa:Os04t0639300-01 |
| Entrez-Gene | 4337160 |