RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g54820.1 View Network Show in Genome Browser |
| Other Names | Os04g0640800 |
| Description | programmed cell death 2 C-terminal domain-containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 32600309-32603388 Nucleotide Length: 1089 |
| Protein-coding | LOC_Os04g54820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g54110 LOC_Os03g02110 LOC_Os03g05720 LOC_Os04g43140 LOC_Os02g37870 LOC_Os04g02150 LOC_Os03g22880 LOC_Os03g58810 LOC_Os03g49210 LOC_Os03g63730 LOC_Os01g07080 More.. |
| Downstream Genes | LOC_Os04g56670 LOC_Os09g30210 LOC_Os09g35670 LOC_Os10g31520 LOC_Os12g03822 LOC_Os11g03990 LOC_Os06g01980 LOC_Os07g33340 LOC_Os07g08030 LOC_Os07g20580 LOC_Os08g05880 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g54820.1 |
| Rice Genome Annotation | LOC_Os04g54820.1 |
| Ricechip | LOC_Os04g54820.1 |
| KEGG | osa:4337167 dosa:Os04t0640800-01 |
| Entrez-Gene | 4337167 |