RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g55030.1 View Network Show in Genome Browser |
| Other Names | Os04g0643000 |
| Description | cullin, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 32726344-32730768 Nucleotide Length: 2196 |
| Protein-coding | LOC_Os04g55030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g40830 LOC_Os01g49000 LOC_Os03g48140 LOC_Os02g47870 LOC_Os03g53660 LOC_Os02g57190 LOC_Os01g27160 LOC_Os03g64290 LOC_Os02g07120 LOC_Os03g06160 LOC_Os01g01700 More.. |
| Downstream Genes | LOC_Os06g29350 LOC_Os06g12690 LOC_Os06g21330 LOC_Os11g26910 LOC_Os05g46030 LOC_Os10g30190 LOC_Os05g05700 LOC_Os09g36830 LOC_Os08g28820 LOC_Os09g10200 LOC_Os08g28800 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g55030.1 |
| Rice Genome Annotation | LOC_Os04g55030.1 |
| Ricechip | LOC_Os04g55030.1 |
| KEGG | osa:4337175 dosa:Os04t0643000-01 |
| Entrez-Gene | 4337175 |