RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g55180.1 View Network Show in Genome Browser |
| Other Names | Os04g0644600 |
| Description | hydrolase, alpha/beta fold family domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 32801073-32807528 Nucleotide Length: 1179 |
| Protein-coding | LOC_Os04g55180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g36750 LOC_Os01g68450 LOC_Os01g70400 LOC_Os01g66000 LOC_Os03g27110 LOC_Os01g44960 LOC_Os03g02640 LOC_Os03g51010 LOC_Os01g45960 LOC_Os02g34810 LOC_Os04g44650 More.. |
| Downstream Genes | LOC_Os08g19140 LOC_Os04g55190 LOC_Os08g32930 LOC_Os07g42994 LOC_Os05g19150 LOC_Os09g34860 LOC_Os07g05470 LOC_Os09g31970 LOC_Os08g40180 LOC_Os12g43970 LOC_Os07g41230 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g55180.1 |
| Rice Genome Annotation | LOC_Os04g55180.1 |
| Ricechip | LOC_Os04g55180.1 |
| KEGG | osa:4337188 dosa:Os04t0644600-01 |
| Entrez-Gene | 4337188 |