RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g55210.1 View Network Show in Genome Browser |
| Other Names | Os04g0644800 |
| Description | chloride channel protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 32820646-32825432 Nucleotide Length: 2427 |
| Protein-coding | LOC_Os04g55210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g48880 LOC_Os03g63940 LOC_Os02g02720 LOC_Os04g31340 LOC_Os03g52690 LOC_Os02g42640 LOC_Os02g06410 LOC_Os01g40420 LOC_Os04g32880 LOC_Os01g69900 LOC_Os04g10750 More.. |
| Downstream Genes | LOC_Os04g55410 LOC_Os08g17600 LOC_Os08g22149 LOC_Os09g26190 LOC_Os12g07190 LOC_Os05g40330 LOC_Os09g17840 LOC_Os09g17830 LOC_Os12g03860 LOC_Os11g05390 LOC_Os11g04030 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g55210.1 |
| Rice Genome Annotation | LOC_Os04g55210.1 |
| Ricechip | LOC_Os04g55210.1 |
| KEGG | osa:4337190 dosa:Os04t0644800-01 |
| Entrez-Gene | 4337190 |