RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g55420.1 View Network Show in Genome Browser |
| Other Names | Os04g0647900 |
| Description | leucine-rich repeat family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 32963272-32967004 Nucleotide Length: 2880 |
| Protein-coding | LOC_Os04g55420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g46340 LOC_Os02g57490 LOC_Os03g19300 LOC_Os02g47970 |
| Downstream Genes | LOC_Os07g04550 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6248 osa-miR5148a osa-miR5148b osa-miR5148c |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g55420.1 |
| Rice Genome Annotation | LOC_Os04g55420.1 |
| Ricechip | LOC_Os04g55420.1 |
| KEGG | osa:4337207 dosa:Os04t0647900-01 |
| Entrez-Gene | 4337207 |