RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g55650.2 View Network Show in Genome Browser |
| Other Names | Os04g0650000 |
| Description | oryzain alpha chain precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 33123071-33126988 Nucleotide Length: 714 |
| Protein-coding | LOC_Os04g55650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g37910 |
| Downstream Genes | LOC_Os12g18110 LOC_Os08g38700 LOC_Os08g12820 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g55650.2 |
| Rice Genome Annotation | LOC_Os04g55650.2 |
| Ricechip | LOC_Os04g55650.2 |
| KEGG | osa:4337223 dosa:Os04t0650000-01 |
| Entrez-Gene | 4337223 |