RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g55670.1 View Network Show in Genome Browser |
| Other Names | Os04g0650366,Os04g0650300 |
| Description | glycosyltransferase family 43 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 33137071-33140263 Nucleotide Length: 1341 |
| Protein-coding | LOC_Os04g55670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g62020 LOC_Os02g15230 LOC_Os03g50560 LOC_Os01g25540 LOC_Os03g16980 LOC_Os03g12250 LOC_Os02g33550 LOC_Os02g43870 LOC_Os01g18240 LOC_Os03g15630 LOC_Os04g52370 More.. |
| Downstream Genes | LOC_Os05g07650 LOC_Os07g38490 LOC_Os05g32110 LOC_Os04g59330 LOC_Os06g49320 LOC_Os07g43990 LOC_Os05g04820 LOC_Os12g25690 LOC_Os07g14850 LOC_Os05g38720 LOC_Os05g48900 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR395a |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g55670.1 |
| Rice Genome Annotation | LOC_Os04g55670.1 |
| Ricechip | LOC_Os04g55670.1 |
| KEGG | osa:4337225 dosa:Os04t0650366-00dosa:Os04t0650300-01 |