RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g55850.1 View Network Show in Genome Browser |
| Other Names | Os04g0652700 |
| Description | nuclease PA3, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 33253917-33256627 Nucleotide Length: 873 |
| Protein-coding | LOC_Os04g55850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g04280 |
| Downstream Genes | LOC_Os11g28340 LOC_Os07g10830 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g55850.1 |
| Rice Genome Annotation | LOC_Os04g55850.1 |
| Ricechip | LOC_Os04g55850.1 |
| KEGG | osa:4337238 dosa:Os04t0652700-01 |
| Entrez-Gene | 4337238 |