RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g55860.1 View Network Show in Genome Browser |
| Other Names | Os04g0652900 |
| Description | peptidyl-tRNA hydrolase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 33258680-33261197 Nucleotide Length: 735 |
| Protein-coding | LOC_Os04g55860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g56620 LOC_Os03g21550 LOC_Os03g08280 LOC_Os03g22740 LOC_Os03g22730 LOC_Os03g05720 LOC_Os03g18410 LOC_Os03g22880 LOC_Os02g49610 LOC_Os02g49180 LOC_Os02g01560 More.. |
| Downstream Genes | LOC_Os12g01390 LOC_Os11g01380 LOC_Os05g43374 LOC_Os07g48300 LOC_Os11g29190 LOC_Os11g40140 LOC_Os08g01130 LOC_Os06g14750 LOC_Os07g02210 LOC_Os12g39070 LOC_Os11g38959 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g55860.1 |
| Rice Genome Annotation | LOC_Os04g55860.1 |
| Ricechip | LOC_Os04g55860.1 |
| KEGG | osa:4337239 dosa:Os04t0652900-01 |
| Entrez-Gene | 4337239 |