RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g55960.1 View Network Show in Genome Browser |
| Other Names | Os04g0653400 |
| Description | NADPH reductase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 33329791-33335865 Nucleotide Length: 2088 |
| Protein-coding | LOC_Os04g55960 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g58510 LOC_Os03g08050 LOC_Os03g08020 LOC_Os03g08010 LOC_Os03g56390 LOC_Os03g58204 LOC_Os03g08440 LOC_Os01g70010 LOC_Os01g59930 LOC_Os03g55150 LOC_Os03g17790 More.. |
| Downstream Genes | LOC_Os09g32976 LOC_Os08g23710 LOC_Os07g08330 LOC_Os11g25260 LOC_Os12g03090 LOC_Os11g03400 LOC_Os09g02700 LOC_Os07g40580 LOC_Os09g32532 LOC_Os08g41300 LOC_Os09g32520 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g55960.1 |
| Rice Genome Annotation | LOC_Os04g55960.1 |
| Ricechip | LOC_Os04g55960.1 |
| KEGG | osa:4337244 dosa:Os04t0653400-01 |
| Entrez-Gene | 4337244 |