RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g56060.1 View Network Show in Genome Browser |
| Other Names | Os04g0654600 |
| Description | protein kinase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 33386622-33391644 Nucleotide Length: 1176 |
| Protein-coding | LOC_Os04g56060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59870 LOC_Os03g01970 LOC_Os01g59150 LOC_Os04g31270 LOC_Os02g05630 LOC_Os02g55560 LOC_Os02g12600 LOC_Os01g71474 LOC_Os03g07300 LOC_Os04g37904 LOC_Os03g27230 More.. |
| Downstream Genes | LOC_Os11g26190 LOC_Os07g32380 LOC_Os06g48300 LOC_Os06g33549 LOC_Os06g42800 LOC_Os08g27490 LOC_Os07g45430 LOC_Os06g44210 LOC_Os09g30100 LOC_Os09g32810 LOC_Os10g41480 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g56060.1 |
| Rice Genome Annotation | LOC_Os04g56060.1 |
| Ricechip | LOC_Os04g56060.1 |
| KEGG | osa:4337248 dosa:Os04t0654600-01 |
| Entrez-Gene | 4337248 |