RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g56140.3 View Network Show in Genome Browser |
| Other Names | Os04g0655600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 33429077-33436222 Nucleotide Length: 1653 |
| Protein-coding | LOC_Os04g56140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g28050 LOC_Os01g33800 LOC_Os01g39260 LOC_Os01g39250 LOC_Os02g04480 LOC_Os04g18010 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3979-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g56140.3 |
| Rice Genome Annotation | LOC_Os04g56140.3 |
| Ricechip | LOC_Os04g56140.3 |
| KEGG | osa:4337256 dosa:Os04t0655600-01 |
| Entrez-Gene | 4337256 |