RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os04g56160.3 View Network Show in Genome Browser
Other Names	Os04g0656100
Description	plasma membrane ATPase, putative, expressed
Gene Attributes	Chromosome: Chr4 CDS Coordinates (5'-3'): 33459582-33464933 Nucleotide Length: 2727
Protein-coding	LOC_Os04g56160

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005215	transporter activity	Molecular Function	IEA
GO:0005575	cellular_component	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA
GO:0005773	vacuole	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os03g48310 LOC_Os02g04320 LOC_Os02g55400 LOC_Os03g01120 LOC_Os03g08560 LOC_Os04g04020 LOC_Os04g51820 LOC_Os02g07830 LOC_Os03g30830 LOC_Os01g55820 LOC_Os01g23620 More..
Downstream Genes	LOC_Os12g44150 LOC_Os07g09340 LOC_Os05g25550 LOC_Os06g08310 LOC_Os11g24560 LOC_Os09g17730 LOC_Os08g30060 LOC_Os12g37360 LOC_Os09g02700 LOC_Os07g14280 LOC_Os06g36990 More..

Database Links
Gramene	LOC_Os04g56160.3
Rice Genome Annotation	LOC_Os04g56160.3
Ricechip	LOC_Os04g56160.3
KEGG	osa:4337257 dosa:Os04t0656100-01
Entrez-Gene	4337257