RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g56330.1 View Network Show in Genome Browser |
| Other Names | Os04g0658400 |
| Description | ABC transporter, ATP-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 33580318-33582347 Nucleotide Length: 1821 |
| Protein-coding | LOC_Os04g56330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g35700 LOC_Os03g19350 LOC_Os02g28980 LOC_Os01g38359 LOC_Os01g62610 LOC_Os04g28420 LOC_Os01g38229 LOC_Os04g36890 |
| Downstream Genes | LOC_Os09g36300 LOC_Os07g48960 LOC_Os05g44310 LOC_Os05g51700 LOC_Os08g41520 LOC_Os08g41390 LOC_Os10g10434 LOC_Os06g13050 LOC_Os05g38370 LOC_Os09g01650 LOC_Os09g32526 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g56330.1 |
| Rice Genome Annotation | LOC_Os04g56330.1 |
| Ricechip | LOC_Os04g56330.1 |
| KEGG | dosa:Os04t0658400-00 |